SDSC-Connect: Connecting Data for Environmental Sciences

As an EPFL Life Science Engineer, my main interest is to do science with an impact. FAIR principals guide my work style, and I strive for user-centric infrastructure to encompass data science in the biomedical and governmental spheres. I have experience in Global Health, working with multi-hospital surveillance system for pandemics, as well as training data scientist (thegraphcourses.org). My core side-interests lie in ocean conservation notably cetacean conservation, biodiversity, and untreated health problematics from lower and middle income countries. I have solid hard skills in problem-solving, data engineering in AI/ML, and have developed soft skills in creativity and social integration. I have acquired domain knowledge in a diversity of fields: from biology-related sciences such as human gut microbiology, epidemiology, and environmental sciences, as well as social sciences such as anthropology and psychology. I am always happy to engage with new people on innovative and impactful thematics so please do reach out!

Robin joined the SDSC in 2022. He received an MSc. in Management, Economics & Consumer Studies from the University of Wageningen in the Netherlands. After his studies, he developed himself into a consultant in the area of ontology & linked data modelling, working mostly in the domain of local and national infrastructure projects. He has a great interest in standardization efforts in the field of semantic web technology standards and is actively working at SDSC with clients and collaborators to stimulate their adoption.

Carlos Vivar Ríos joined the SDSC in 2023, where he is part of the Open Research Data and Engagement Unit (ORDES). As a multidisciplinary data engineer, he brings a diverse background in biology, cognitive sciences, and bioinformatics from the University of Malaga. His multifaceted professional career spans several disciplines, including genomics at RIKEN in Yokohama, multidimensional image analysis in microscopy at the University of Lausanne (UNIL), and cellular biology modeling at INRIA in Lyon. Carlos has been involved in a variety of projects, such as analyzing astrocyte calcium dynamics, de novo sequencing Solea senegalensis, drug repurposing for Alzheimer's based on GWAS studies, conducting geospatial analysis for linguistic corpora, and assessing drought through remote sensing. He is dedicated to advancing reproducible research methods and actively supports the open science movement.

Oksana is a disruptive innovator bringing her positive energy to projects. Driven by her curiosity and can-do attitude she excels in industrial and academic contexts. Oksana earned her PhD in Life Sciences and Bioinformatics from the University of Lausanne after two MSc in Bioinformatics and in Information Systems from the University of Geneva. For more than 10 years, she has been committed to actively promoting the value of data science and advocating the best practices for reproducible and ethical research. She believes that Swiss Data Science Center is a key player in building a competitive data economy in Switzerland leveraging its innovative potential and renown commitment to quality.

Nora earned her Ph.D. in Computer Science/Bioinformatics from the University of Tübingen, where she focused on the in silico design of peptide-based vaccines using combinatorial optimization and machine learning. During her postdoctoral fellowship at Memorial Sloan Kettering Cancer Center in New York, and later as a staff scientist at the New York Genome Center, she worked on metagenomics, infectious diseases, and cancer. In 2015, Nora joined NEXUS Personalized Health Technologies at ETH Zurich where her focus shifted towards the management of clinical and biomedical research data. In May 2024, she joined the Swiss Data Science Center as Head of Biomedical Data Science.

Anna joined SDSC as a Data Scientist focusing on industry collaborations in July 2019. She completed her PhD in Bioinformatics at the University of Luxembourg, where she analysed large-scale heterogeneous datasets and leveraged multiple disciplines: Statistics, Network Analysis, and Machine Learning. Before joining SDSC, Anna worked as a Data Scientist at Deloitte Luxembourg, with a focus on computer vision and time-series analysis.Currently, Anna is a Principal Data Scientist based at the ETH Zurich office, where she leads biomedical collaborations with industry partners. Anna works on a range of projects: protein properties prediction, biomanufacturing optimization, statistical model evaluation and others.

Guillaume Obozinski graduated with a PhD in Statistics from UC Berkeley in 2009. He did his postdoc and held until 2012 a researcher position in the Willow and Sierra teams at INRIA and Ecole Normale Supérieure in Paris. He was then Research Faculty at Ecole des Ponts ParisTech until 2018. Guillaume has broad interests in statistics and machine learning and worked over time on sparse modeling, optimization for large scale learning, graphical models, relational learning and semantic embeddings, with applications in various domains from computational biology to computer vision.

Snežana joined the SDSC industry team in June 2021 on a mission to advance adoption of modern data driven solutions in the domain of public health care. She has a background in experimental particle physics with a Diploma from the ETH Zurich and a PhD from the University of Geneva. Snežana pursued fundamental research in the field of high energy physics at CERN for nine years, harnessing the power of machine learning and statistical methods to uncover the traces of new physics in petabytes of proton-proton collision data and to develop innovative particle identification algorithms. Since 2018, Snežana served as a Data Science consultant, supporting partners from industries such as manufacturing, insurances, compliance services and online platforms in creating business value from internal and external data.

Marisol has a degree in Law and more than 15 years of experience working as a notary officer in Madrid. After relocating to Switzerland with her family, she obtained a certification to teach Spanish as a foreign language, dedicating four years to teaching Spanish online to students of all ages and backgrounds. Marisol has returned to her professional roots as an administrative assistant, joining the SDSC team in June 2023.

Saurabh Bhargava, joined the SDSC as a Principal Data Scientist in the Industry Cell at the Zürich office in 2022. Saurabh previously worked in the retail sector and the advertising industry in Germany. He lead and built various data products for customers using state of the art machine learning methods and industrializing them thereby adding value for the customers. He completed his PhD from ETH Zürich in June 2017 specializing in machine learning applications on Audio data. He obtained his Master’s and Bachelor’s degrees from EPFL and Indian Institute of Technology (IIT), Roorkee, India in 2011 and 2009 respectively. His interests and expertise are in combining state of the art data science and data engineering tools for building scalable data products.

Christian joined the SDSC in July 2021 as a data scientist in the industry cell. Before that he worked at the Media Technology Center at ETH Zurich to develop new ML technology for their industry partners. He completed his Master's degree in Mathematics at ETH Zurich (2017) with focus on algorithmics and machine learning. After his studies he worked as a online marketing data analyst in the news publishing business. His expertise lies in statistics, NLP and software engineering.

Silvia holds an MSc in Computer Science from EPFL and a PhD in Computer Science from the University of York, UK. She has been a senior research fellow at the University of Trento and later at Politecnico di Milano, Italy. Here, she had the chance to work on Marie Curie and ERC projects relating to natural language processing. From 2012 to 2019, she was a Senior Manager and NLP expert at ELCA Informatique Switzerland, whose AI department she helped create and expand. Silvia joined the Swiss Data Science Center in 2019 and is currently its Chief Transformation Officer, in charge of the team leading organizations to digital transformation.

Saurabh Bhargava, joined the SDSC as a Principal Data Scientist in the Industry Cell at the Zürich office in 2022. Saurabh previously worked in the retail sector and the advertising industry in Germany. He lead and built various data products for customers using state of the art machine learning methods and industrializing them thereby adding value for the customers. He completed his PhD from ETH Zürich in June 2017 specializing in machine learning applications on Audio data. He obtained his Master’s and Bachelor’s degrees from EPFL and Indian Institute of Technology (IIT), Roorkee, India in 2011 and 2009 respectively. His interests and expertise are in combining state of the art data science and data engineering tools for building scalable data products.

Nora earned her Ph.D. in Computer Science/Bioinformatics from the University of Tübingen, where she focused on the in silico design of peptide-based vaccines using combinatorial optimization and machine learning. During her postdoctoral fellowship at Memorial Sloan Kettering Cancer Center in New York, and later as a staff scientist at the New York Genome Center, she worked on metagenomics, infectious diseases, and cancer. In 2015, Nora joined NEXUS Personalized Health Technologies at ETH Zurich where her focus shifted towards the management of clinical and biomedical research data. In May 2024, she joined the Swiss Data Science Center as Head of Biomedical Data Science.

Irene joined the SDSC in August 2024 as a Senior Biomedical Data Scientist. Trained as an evolutionary biologist, she worked in academic research in Switzerland and abroad before transitioning to bioinformatics, where she specialized in supporting researchers with the analysis of next generation sequencing data. At SDSC, her focus is on data engineering, management, and analysis of biomedical data.

Xinrui obtained her Ph.D. in Computer Science from ETH Zürich in 2022 under the supervision of Prof. Gunnar Rätsch. During her doctoral study, she was devoted to applying machine learning algorithms to solving healthcare problems. Xinrui also holds a M.Sc. degree in Electrical Engineering from EPFL in Switzerland and a B.Eng. degree in Electronic Information Science and Technology from Tsinghua University in China. Before joining the SDSC, Xinrui worked for the NEXUS Personalized Health Technologies platform at ETH Zürich.

Sebastian Salzmann is a molecular biologist and data scientist who holds an MSc degree in Molecular Health Science from ETH (2016) and Datascience (2024) from ZHAW.

After graduating from his first master he worked in the Analytical Chemistry department at the Swiss Federal Institute of Aquatic Sciences (Eawag) as a research software engineer in environmental massspectrometry.

With a mixed background in the molecular life sciences, chemistry and information technology he is joining SDSC as a Biomedical Data Engineer to apply his skills in the domains of data engineering, management and analysis of biomedical data.

Guillaume Obozinski graduated with a PhD in Statistics from UC Berkeley in 2009. He did his postdoc and held until 2012 a researcher position in the Willow and Sierra teams at INRIA and Ecole Normale Supérieure in Paris. He was then Research Faculty at Ecole des Ponts ParisTech until 2018. Guillaume has broad interests in statistics and machine learning and worked over time on sparse modeling, optimization for large scale learning, graphical models, relational learning and semantic embeddings, with applications in various domains from computational biology to computer vision.

Saurabh Bhargava, joined the SDSC as a Principal Data Scientist in the Industry Cell at the Zürich office in 2022. Saurabh previously worked in the retail sector and the advertising industry in Germany. He lead and built various data products for customers using state of the art machine learning methods and industrializing them thereby adding value for the customers. He completed his PhD from ETH Zürich in June 2017 specializing in machine learning applications on Audio data. He obtained his Master’s and Bachelor’s degrees from EPFL and Indian Institute of Technology (IIT), Roorkee, India in 2011 and 2009 respectively. His interests and expertise are in combining state of the art data science and data engineering tools for building scalable data products.

Matthias Galipaud obtained his PhD in evolutionary biology in 2012 from the University of Burgundy in Dijon (France), and held postdoctoral positions as a mathematical biologist at the university of Bielefeld (Germany) and the university of Zurich, where he researched the evolutionary theories of aging and mate choice. In 2020, he became a data scientist, developing machine learning solutions for startups in Switzerland and Australia before joining the SDSC Innovation Team in November 2022.

Dan received an MSc in civil and environmental engineering from UC Berkeley and a Ph.D. from EPFL, where he developed models combining machine learning and geographic information systems to estimate renewable energy potentials on a large scale. After serving as a researcher/data scientist at Unisanté (Lausanne) and completing a one-year postdoc at the Quebec Artificial Intelligence Institute (Mila) in Montréal, Dan joined the SDSC Innovation team. His work has generally been focusing on crafting and tailoring machine learning methods and deep learning architectures for a variety of domains, most notably the spatio-temporal modeling and forecasting of environmental and energy related variables, as well as multiple applications in public health research.

Before joining SDSC, Arshjot Khehra received his MSc in Artificial Intelligence from USI Lugano, where he completed his thesis on hierarchical graph reinforcement learning. Previously, he worked for 4+ years across India and Singapore gaining data science experience in insurance, logistics, and manufacturing sectors. He also holds a BSc in Industrial Engineering from PEC Chandigarh. Over the course of his career, Arshjot worked on a wide array of projects, such as, handwritten text recognition and generation, voice matching across phone call recordings, policy lapse rate prediction for customer retention, and automated insurance claim processing.

Silvia holds an MSc in Computer Science from EPFL and a PhD in Computer Science from the University of York, UK. She has been a senior research fellow at the University of Trento and later at Politecnico di Milano, Italy. Here, she had the chance to work on Marie Curie and ERC projects relating to natural language processing. From 2012 to 2019, she was a Senior Manager and NLP expert at ELCA Informatique Switzerland, whose AI department she helped create and expand. Silvia joined the Swiss Data Science Center in 2019 and is currently its Chief Transformation Officer, in charge of the team leading organizations to digital transformation.